Essential Python For Genome Science

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Before Start
Chapter Contents
Prerequisites
- About the UNIX system
- About python
UNDERSTAND RAW DATA
Work Environment
Python and UNIX System
Data Cleaning
PYTHON BASICS
Genome Science Data
- NGS Data Formats and Tools 🚩
- The Python Packages 🚩
Data visualization
Use R in Python
- Why? 🚩
- rpy2 🚩
Gotchas

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Genome Science Data
NGS Data Formats and Tools 🚩

SAM/BAM 🚩

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